Mahony Lab

Penn State University

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Teaching

Educational Bioinformatics Apps

  • Pairwise sequence alignment (Needleman-Wunsch & Smith-Waterman)
  • Phylogenetic tree building (UPGMA and Neighbor-Joining)
  • Multiple sequence alignment (Progressive Profile Alignment)
  • Burrows-Wheeler Transform
  • MEME-like motif-finding (Expectation Maximization)

Principal Investigator

Shaun Mahony

Follow me on Bluesky Follow @mahonylab

Affiliations

  • Dept. of Biochemistry & Molecular Biology
  • Center for Eukaryotic Gene Regulation
  • Center for Comparative Genomics and Bioinformatics

Graduate Programs

BG, BMMB, MCIBS

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